中国大鲵脑cDNA文库构建及促甲状腺激素β亚基基因cDNA的克隆和序列分析
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广东省教育部产学研结合项目,广东省科技计划项目中山大学青年教师科研启动基金


Construction of cDNA Library from the brain of Chinese giant salamander Andrias davidianus with Cloning and sequence Analysis of the cDNA encoding thyroid-stimulating hormone β-subunit
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    摘要:

    以大鲵脑组织为材料,提取总RNA,应用CloneminerTM文库构建技术构建了cDNA文库。经检测,文库初始滴度为5.0×105 cfu•mL-1,重组率为91.70%,插入片断大小在0.35~3.9 kb,平均插入片段大小为0.791 kb,文库扩增后滴度为4.0×109 cfu•mL-1。随机挑选200个阳性克隆测序,经生物信息学分析,发现20个片段与已报道的基因有较高同源性,包括促甲状腺激素基因、生长激素基因及催乳素基因等,其中三个克隆为促甲状腺激素β亚基(TSHβ)基因。序列分析表明,TSHβ cDNA全长序列为705 bp,包含417 bp开放读码框,编码138个氨基酸序列,其中前19个氨基酸为大鲵TSHβ亚基信号肽部分,后接119个氨基酸组成的TSHβ亚基成熟肽。同源性分析显示,大鲵TSHβ亚基与两栖类牛蛙、蟾蜍及爪蟾同一蛋白的同源性分别为53.6%、52.2%和60.3%。采用邻接法和最大简约法对部分脊椎动物TSHβ氨基酸序列构建分子系统树,结果显示有尾目大鲵为两栖动物中较早分化的一支,表明其进化地位较原始。RT-PCR组织分布分析发现,TSHβ基因除垂体有表达外,性腺也有少量表达。

    Abstract:

    A cDNA library from the brain of Andrias davidianus was constructed using the CloneMinerTM cDNA Library Construction Kit. The titer of the primary library was 1.5×105 cfu·mL-1, and the recombined efficiency of cDNA library was 91.70%. The average insert size was 0.791 kb, while the titer of amplified library was 4.0×109 cfu·mL-1. The thyroid-stimulating hormone β-subunit (TSHβ) cDNA was obtained through sequencing clones picked randomly, suggesting some full length cDNAs were contained in the library. TSHβ was 705 bp in length, including an open reading frame of 417 bp. The deduced TSHβ subunit contains 138 amino acids consisting of a putative signal peptide of 19 amino acides and a putative mature protein of 119 amino acides. The deduced amino acides of the Chinese giant salamander TSHβ mature protein shares identities of 53.6%, 52.2% and 60.3% separately with bullfrog, Japanese toad and xenopus. The vertebrate TSHβ protein sequences had been used to construct Neighbor-joining (NJ) and Maximum parsimony (MP) phylogenetic tree. As analyzed, Andrias davidianus derived from amphibia firstly, which could reflect its original evolutionary status. RT-PCR analysis indicated that the TSHβ mRNA was expressed abundantly not only in pituitary but also in gonads.

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杨丽萍,杨慧荣,张勇,刘云,黄海,刘晓春,蒙子宁,黄俊海,林浩然.中国大鲵脑cDNA文库构建及促甲状腺激素β亚基基因cDNA的克隆和序列分析[J].水产学报,2008,32(4):507~516

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  • 收稿日期:2007-10-09
  • 最后修改日期:2008-02-25
  • 录用日期:2008-05-27
  • 在线发布日期: 2008-07-07
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